ITS2_asco

ITS2 sequences of ascomycetous fungi from INSD database

ITS1_basi

ITS1 sequences of basidiomycetous fungi from INSD databases

ITS2_UNITE

ITS2 sequences of UNITE accessioned fung

ITS2_basi

ITS2 sequences of basidiomycetous fungi from INSD database

ITS1_UNITE

Its1 sequences of UNITE accessioned fungi

Quality and metadata annotations of fungal ITS sequences by mycorrhiza types.

1<p>all sequences belonging to EcM lineages regardless of isolation source;</p>2<p>all sequences belonging to Glomeromycota, except <i>Geosiphon;</i></p>3<p>all sequences derived from roots (with or without a culturing step) of the respective host plants;</p>4<p>Chimeric sequences consist of two or more fragments of fungal sequences and are therefore not assigned below the kingdom level;</p>5<p>nd, not determined;</p>6<p>Annotated–sum of original annotations and metadata provided in the course of this study;</p>7<p>formation of coils in ErM, formation of pelotons, stimulation of germination or development in OM.</p

Screenshot of the UNITE search page (http://unite.ut.ee/).

<p>This search tool allows queries of sequences based on taxonomic information and associated metadata.</p

Contribution of different isolation sources to the number of INSD sequences in the most common ectomycorrhizal fungal lineages.

<p>Contribution of different isolation sources to the number of INSD sequences in the most common ectomycorrhizal fungal lineages.</p

Scheme of the metadata annotation workflow.

<p>Shaded boxes indicate procedures performed and/or saved over the PlutoF workbench (<a href="http://plutof.ut.ee/" target="_blank">http://plutof.ut.ee/</a>).</p